TP sensor Alignment issue
 

long story short I had to drop my engine out of my car (04 MT) and I have everything back together and the car runs, but it get the 2109 DTC and it will not rev over 2k I removed the throttle position sensor and the gear under it on the intake. I know my problem is in how that gear is aligned to the sensor, I heave searched the forum, alldata and the internet and I can not find any info on replacing the tp sensor just how to check it electronically. if anyone knows how to align it you would be awesome